Medicine
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This repository contains the published and unpublished research of the Faculty of Medicine by the staff members of the faculty
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Item Mitochondrial metabolic genes provide phylogeographic relationships of global collections of Aedes aegypti (Diptera: Culicidae)(Public Library of Science, 2020) Fernando, H.S.D.; Hapugoda, M.; Perera, R.; Black Iv, W.C.; de Silva, B.G.D.N.K.ABSTRACT: Phylogeographic relationships among global collections of the mosquito Aedes aegypti were evaluated using the mitochondrial Cytochrome C Oxidase 1 (CO1) and NADH dehydrogenase subunit 4 (ND4) genes including new sequences from Sri Lanka. Phylogeographic analysis estimated that Ae. aegypti arose as a species ~614 thousand years ago (kya) in the late Pleistocene. At 545 kya an "early" East African clade arose that continued to differentiate in East Africa, and eventually gave rise to three lineages one of which is distributed throughout all tropical and subtropical regions, a second that contains Southeast Asian/Sri Lankan mosquitoes and a third that contains mostly New World mosquitoes. West African collections were not represented in this early clade. The late clade continued to differentiate throughout Africa and gave rise to a lineage that spread globally. The most recent branches of the late clade are represented by South-East Asia and India/Pakistan collections. Analysis of migration rates suggests abundant gene flow between India/Pakistan and the rest of the world with the exception of Africa.Item Gene flow patterns among Aedes aegypti (Diptera: Culicidae) populations in Sri Lanka(MDPI AG, 2020) Fernando, H.S.D.; Hapugoda, M.; Perera, R.; Black Iv, W.C.; de Silva, B.G.D.N.K.ABSTRACT:In Sri Lanka, dengue is the most serious arboviral disease. Recent increases in dengue cases suggest a higher infection rate and spread of the disease to new areas. The present study explores gene flow patterns of Ae. aegypti, the main vector of dengue disease, among 10 collection sites including major ports and inland cities using variations at 11 microsatellite loci. Discriminant analysis of principal components (DAPC) and k-means clustering estimated eight genetic clusters. Analysis of Molecular Variance (AMOVA) estimated equal variances among cities and among collections in Colombo, Sri Lanka. Significant evidence, although weak, was detected for isolation by distance. Analysis of gene flow rates and directions using MIGRATE-n indicated that populations throughout the island served as a source of immigrants for Colombo with abundant gene flow among major commercial cities in Sri Lanka, which appear to receive migrant mosquitoes from throughout Sri Lanka. The observed patterns probably arise through human movement of Ae. aegypti during commerce from throughout Sri Lanka into Colombo increasing the risk of spread. The patterns uncovered in this study are significant for global health as Sri Lanka is situated along a key international shipping route. KEYWORDS: Aedes aegypti; Sri Lanka; gene flow patterns; population structure.Item A Preliminary study of genetic estimates of population structure of Aedes aegypti populations in three districts, Sri Lanka(Sri Lanka Association for the Advancement of Science, 2014) Fernando, H.S.D; Hapugoda, M.D.; de Silva, B.G.D.N.K.Item Prevalence of Anopheline species in Ampara district, Sri Lanka(University of Kelaniya, 2012) Fernando, M.A.S.T.; Gunathilaka, P.A.D.H.N.; Hapugoda, M.D.; de Silva, B.G.D.N.K.; Wijeyerathne, P.; Abeyewickreme, W.Introduction: Investigating the presence of primary and secondary vectors of malaria in the selected areas where no entomological surveillance was carried out for about 30 years due to ethnic conflict. Objective: To study prevalence of malaria vector in Ampara District and to assess the risk of malaria in the area. Method: Surveillance was preformed from January 2011 to June 2012 in 4 selected areas (i.e. Panama, Thirukkovil, Mahaoya and Dehiattakandiya) in Ampara District. From each area 4 localities (total 16 localities) were selected for the sample collection in order to ensure full coverage of the District. Cattle Baited Hut Collection (CBHC) and Cattle Baited Net Collection (CBNC) were performed as sample collecting methods on monthly basis throughout the surveillance period. Results: Mosquito densities for each collected Anopheles species were calculated as density per hut or net for CBHT and CBNT respectively. 14 Anopheles species were recorded from CBHC with high prevalence for An. subpictus (68.58%), An. nigerrimus (14.02%) and An. vagus (6.73%). 16 Anopheles species were recorded from CBNC with high prevelance of An. nigerrimus (50.07%), An. peditaeniatus (16.12%), An. pseudojemesi (9.21%) and An. subpictus (7.68%). An. culicifacies (primary malaria vector in Sri Lanka) recorded with lesser densities but An. subpictus, the secondary vector for malaria in Sri Lanka was predominant thorough out this study. Conclusions: The presence of primary and secondary malaria vectors in the area may cause a malaria epidemic in these areas. Hence, it is essential to study the seasonal prevalence of Anopheles species in order to initiate timely controlling measures in Ampara District.Item Study on house dwelling Anopheline species in Batticaloa District, Sri Lanka(University of Kelaniya, 2011) Fernando, M.A.S.T.; Gunathilaka, P.A.D.H.N.; Hapugoda, M.D.; Abeyewickreme, W.; de Silva, B.G.D.N.K.; Wijeyerathne, P.Even though the malaria cases are less, vectors which transmit the disease are still present. No proper vector surveys have been carried out in the eastern area of Sri Lanka for more than 30 years, due to the ethnic conflict. The objective is to study house dwelling Anopheline densities to assess the risk of malaria prior to eliminating malaria, and implementing vector control strategies. Surveillance was preformed from July 2010 to December 2010 in 3 selected areas (i.e. Mandur, Vakanery, and Vakarai) in Batticaloa District. Each area was divided into 4 sub sampling sites attaining a total of 12 sub sites in order to ensure full coverage of the whole district. Hand Catch and Window Trap collections were continued to collect mosquito specimens from 44 randomly selected houses in each sub site (n= 528) on a weekly basis. Mosquito densities for each collected Anopheles species were calculated as density per man hour and density per trap for both Hand Catch and Window Trap Collection respectively. Four species were recorded from Hand Catch (i.e. An. barbirostris (0.002), An. nigerrimus (0.081), An. subpictus (1.813) and An. vagus (0.005)). Four species observed from Window Trap Collection (i.e. An. nigerrimus (0.067), An. subpictus (0.700), An. vagus (0.010) and An. varuna (0.174)). An. subpictus, the secondary vector for Malaria in Sri Lanka was predominant throughout this study. The presence of some Anopheline mosquitoes which can act as potential malaria vectors may cause malaria epidemics in these areas. Hence, it is essential to continue more surveillance related to Larval and Trap collections to get the entire picture of Vector composition and prevalence in Batticaloa District.