The worldwide prevalence of the UGT-1A1 promoter polymorphism as a contributor for phenotypic variability in thalassaemia

Abstract

INTRODUCTION: The number of TA repeats in the promoter region of the UGTIA1 gene is involved in fine-tuning of the serum bilirubin level. People who inherit more TA repeats than in the wild type (6), tend to have higher than normal Serum bilirubin levels. When homozygosity for 7 repeats is co-inherited with hereditary anaemias the patients have an elevated serum bilirubin level and an increased incidence of gallstone formation. OBJECTIVES: To investigate the pattern of UGTIAI promoter genotype in several diverse populations across the world. METHODS: A fluorescent labeled PCR method was designed which would amplify the region of interest of the UGTIAI gene. The PCR products were separated using (PAGE) polyacrelymide gel electrophoresis. DNA samples for the study were collected from people from 15 countries, from 5 continents. RESULTS: We found remarkable diversity of the UGTIAI polymorphism amongst people of African origin. The haplotype 7/7 was found in very high frequencies in India. Sri Lanka and Bangladesh, and was extremely rare amongst people of Southeast Asian origin. The Europeans and the Africans had intermediate frequencies. DISCUSSION: These results suggest that in people of Southeast Asian origin, a group that has a high prevalence of thalassaemia and other heamoglobinopathies, the UGTIAI polymorphisms are unlikely to be important genetic modifiers of the phenotype. However, Sri Lankans and other South Asians are very likely to be influenced by this polymorphism. These results also support the theory of African origins of Homo sapiens.