Plant and Molecular Biology
Permanent URI for this collectionhttp://repository.kln.ac.lk/handle/123456789/22641
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Item Suppression and management of Meloidogyne incognita in soil using Trichoderma harzianum NFCF160 and Trichoderma virens Isf-77(Malaysian Journal of Microbiology, 2022) Rajakaruna, N.; Undugoda, L.; Kannangara, S.; Abeywickrama, K.Aims: Meloidogyne incognita adversely affects numerous crop plants worldwide. Therefore, the modern world has been moving towards biocontrol methods to prevent nematode attacks. This study was aimed to (i) investigate the potential use of Trichoderma harzianum NFCF160 and T. virens Isf-77 in managing M. incognita in soil and (ii) identify trapping mechanisms employed by both Trichoderma strains to suppress M. incognita. Methodology and results: Three weeks old, Basella alba L. plants were subjected to five different treatments. The above and below ground growth parameters and the galling indices of these plants were measured every four weeks for three sampling times. Trapping mechanisms employed by Trichoderma strains were examined following plate assays. Plants treated with T. harzianum NFCF160 and T. virens Isf-77 had significantly higher values for the total number of leaves (34 ± 2.84) and (27 ± 2.61), fresh weight of the shoot (81 ± 9.51 g) and (91 ± 9.70 g), dry weight of the shoot (71 ± 5.24 g) and (62 ± 5.81 g), respectively eight weeks after inoculation of M. incognita. Significantly low galling indices (2 and 2) were recorded in B. alba treated with Trichoderma strains. Both Trichoderma strains exhibited various nematode-trapping mechanisms, such as non-constricting rings and adhesive spores. Conclusion, significance and impact of study: This investigation highlighted the potential of both Trichoderma strains as biocontrol agents to control M. incognita effect in sustainable agriculture.Item Morphological and molecular identification of fungi for their association with postharvest fruit rots in some selected citrus species(2022) Jayasekara, A.; Daranagama, A.; Kodituwakku, T.D.; Abeywickrama, K.Purpose: The availability of fresh Citrus fruits is limited by their susceptibility to invasion by microbial pathogens which leads to cause serious postharvest losses. The present study was carried out to isolate and morphologically identify postharvest fungal associations from selected Citrus fruit species (C. sinensis, C. limon, C. crenatifolia and C. medica) and to confirm their identity by molecular characterization. Research method: Postharvest fungal associations of selected Citrus fruit species were isolated, and identification was done based on morphological characteristics. Confirmation of fungal associations was done through phylogenetic analysis of newly generated ITS sequencing data. Further, frequency of occurrence of each fungal isolate was calculated in three different districts in Sri Lanka. Findings: From the morphological and molecular identification, Collectrichum fructicola, Collectrichum gloeosporioides, Lasiodiplodia theobromae, Aspergillus niger and Pestalotiopsis sp. were recorded from C. sinensis. Neofusicoccum parvum, Collectrichum gigasporium and Aspergillus clavatus were isolated from C. crenatifolia. Further, Lasiodiplodia theobromae and L. pseudotheobromae were the only fungal association isolated from C. limon and C. medica fruit species, respectively. It is worthwhile noting that this is the first report of association of the C. gigasporium and Pestalotiopsis sp. from Citrus fruits in Sri Lanka. Research limitations: Since this research was mainly focused on the isolation and identification of the potential fungal associations, pathogenicity evaluation could not be carried out. Originality/Value: Findings of potential disease causative agents in citrus will be valuable for agriculture sector, to adopt and practice effective strategies to minimize postharvest losses of citrus fruits.Item Dip treatment of Aloe vera gel and Aloe vera in combination with cinnamon essential oils on stem-end rot of mango cv. ‘Karthakolomban’(2022) Karunarathna, N. S. N.; Abeywickrama, K.; Kodituwakku, T. D.This study was conducted to investigate the applicability of Aloe vera gel alone and mixed with cinnamon leaf and bark oil in controlling stem-end rot (SER) and extending the shelf life of mango cv. ‘Karthakolomban’. Mangoes were subjected to dip treatments of Aloe vera gel and Aloe vera gel in combination with cinnamon bark oil (2.0 μL/mL) and cinnamon leaf oil (2.0 μL/mL) and their pathological, physicochemical, sensory properties, and percentage shriveling were evaluated after a 10 d storage period at 12-14℃. Dip treatment of Aloe vera gel + cinnamon oils and Aloe vera gel reduced SER by 3.0 - 6.0%. Physicochemical and sensory properties did not show drastic alterations among all treatments and controls. Mangoes subjected to Aloe vera gel + cinnamon oil treatments demonstrated 0% shriveling. Uncoated fruits showed the highest shriveling. The findings highlight that Aloe vera gel may have a better prospect in the preservation and quality maintenance of mango in combination with cinnamon oils.Item Physiological disorders of selected Citrus fruit species in Sri Lanka and their effect on fruit quality(JOURNAL OF HORTICULTURE AND POSTHARVEST RESEARCH, 2021) Jayasekara, A.; Abeywickrama, K.; Daranagama, A.; Kodituwakku, T.Purpose: This study was conducted to identify the physiological disorders and their symptoms of selected Citrus fruit species (C. sinensis, C. limon and C. crenatifolia). Furthermore, it was aimed to determine whether physicochemical and sensory properties were affected by physiological disorders. Research method: Citrus fruits with physiological disorders were observed separately for visible changes and characters were recorded and photographed. Moreover, Citrus fruits with physiological disorders were analyzed for physicochemical and sensory properties. Findings: Many physiological disorders were recorded from three Citrus fruit species including chilling injury, sun burn, stem-end rind breakdown, oleocellosis, rind disorder, puff and crease, granulation, wind injury, peteca, fruit splitting and fruit cracking. Based on the overall result of sensory analysis, it can be concluded that most of the physiological disorders in studied Citrus species appear on the peel but not adversely affect the edible internal portion of the fruits. Physicochemical properties of C. limon are not adversely affected by physiological disorders whereas C. sinensis and C. crenatifolia are affected by physiological disorders. Limitations: Availability of selected Citrus fruit species throughout the year is limited due to their seasonality. Originality/Value: This study provides novel information about the physiological disorders of some Citrus species in Sri Lanka and other parts of Asia and a future potential exists in controlling these disorders to provide healthy and quality fruits to the market.Item In vitro and in vivo Application of Eco-friendly Treatments to Control Postharvest Stem-end Rot of Naturally Infected Avocado (cv. Pollock)(The Journal of Agricultural Sciences - Sri Lanka, 2021) Nilmini, R.K.; Kodituwakku, T.D.; Abeywickrama, K.; Kuruppu, M.Purpose: Stem-end rot (SER) is an endophytic fungal infection of avocado causing significant postharvest losses, affecting its marketability. This study was conducted to identify effective concentrations of selected eco-friendly essential oils and chemicals to control SER pathogens by conducting in vitro bioassays and to develop treatments to control SER in naturally infected avocado (cv. Pollock) using less hazardous alternatives to synthetic fungicides. Research Method: In vitro disc volatilization and poison food bioassays were conducted to identify inhibitory concentrations of some essential oils and chemicals against SER pathogens. Avocado fruits were subjected to eco-friendly fumigation and dip treatments and their pathological, physicochemical and sensory properties were assessed after 7 days of storage at 15 °C. Findings: Disc volatilization bioassay revealed that 5 µL/plate clove oil was most effective against Lasiodiplodia theobromae, Diaporthe nelumbonis and Fusarium oxysporum. According to Poisoned food bioassay, 5% (w/v) sodium bicarbonate and 0.07% (v/v) acetic acid were highly effective against the test pathogens. SER incidence of avocado fruits has been successfully delayed for 7 days after subjecting to fumigation treatment with clove oil and dip treatments with sodium bicarbonate and acetic acid, followed by storage at 15 °C. None of the treatments adversely affected physicochemical and sensory properties of avocado. Originality/Value: Treatments could be further improved by conducting a medium-scale in vivo trial to obtain good quality avocado with higher consumer acceptance.Item Pathogenicity of Stem-end Rot Associated Fungi Isolated from Karthakolomban Mango and Their Control by Spray and Fumigation Treatments with Selected Essential OilsPathogenicity of Stem-end Rot Associated Fungi Isolated from Karthakolomban Mango and Their Control by Spray and Fumigation Treatments with Selected Essential Oils(The Journal of Agricultural Sciences - Sri Lanka, 2020) Kodituwakku, T. D.; Abeywickrama, K.; Karunanayake, K. O. L. C.Purpose: Stem-end rot (SER) is a major disease of mango that causes serious postharvest losses. Application of fungicides is environmentally unsound and is being practiced currently in its control. This study was conducted to develop essential oil treatment systems as eco-friendly strategies to control SER of Karthakolomban mango and to determine the pathogenicity of several SER associated fungi. Research Method: Pathogenicity of four fungal isolates in SER was assessed by inoculating them on Karthakolomban mango fruits. Karthakolomban mango fruits were subjected to spray and fumigation treatments using four essential oils and their pathological, physicochemical and sensory properties were evaluated after a 8-day storage at 12 – 14 ºC. Findings: Lasiodiplodia theobromae, Pestalotiopsis sp., Phomopsis sp. and Xylaria feejeensis were the major SER pathogens of mango. X. feejeensis was identifi ed as a SER pathogen for the fi rst time in Sri Lanka. Spray and fumigation treatments conducted using basil, clove, cinnamon leaf and cinnamon bark oils eff ectively controlled SER of Karthakolomban mango stored at 12 – 14 ºC for 8 days. Mango sprayed with 1.6 μL/mL cinnamon bark oil has displayed no SER after induced ripening. None of the treatments caused drastic alterations in physicochemical and sensory properties of mango. Research Limitations: Storage period of mango was restricted to 8 days due to the initiation of natural ripening which was the major limitation to achieving a further enhanced shelf life. Originality/value: The treatment strategies developed by this research could be commercialized as biosafe SER control strategies in reducing postharvest losses of mango in the local and international trade.